2010

E. Trizac; Y. Levy; P.G. Wolynes 2010 Capillarity theory for the fly-casting mechanism. Proc. Nat. Acad. Sci. USA
R. Hermsen; T. Hwa 2010 Sources and sinks: a stochastic model of evolution in heterogeneous environments. Physical Review Letters
B. Lu; M.J. Holst; J.A. McCammon; Y.C. Zhou 2010 Poisson-Nernst-Planck equations for simulating biomolecular diffusion-reaction processes I: Finite element solutions.
J.D. Durrant; J.A. McCammon 2010 NNScore: A Neural-Network-Based Scoring Function for the Characterization of Protein-Ligand Complexes. J. Chem. Info. Model.
M.C. Prentiss; D.J. Wales; P.G. Wolynes 2010 The Energy Landscape, Folding Pathways and the Kinetics of a Knotted Protein. Plos Comp. Biol.

2009

B.J. Grant; A.A. Gorfe; J.A. McCammon 2009 Ras Conformational Switching: Simulating Nucleotide-Dependent Conformational Transitions with Accelerated Molecular Dynamics. Plos Comp. Biol.
S.L. Williams; A. McCammon 2009 Conformational Dynamics of the Flexible Catalytic Loop in Mycobacterium tuberculosis 1-Deoxy-d-xylulose 5-Phosphate Reductoisomerase. Chem. Biol. Drug Design
P.C. Whitford; A. Schug; J. Saunders; S.P. Hennelly; J.N. Onuchic; K.Y. Sanbonmatsu 2009 Nonlocal Helix Formation Is Key to Understanding S-Adenosylmethionine-1 Riboswitch Function. Biophys. J.
J.M. Wang; T.J. Hou; X.J. Xu 2009 Aqueous Solubility Prediction Based on Weighted Atom Type Counts and Solvent Accessible Surface Areas. J. Chem. Info. Model.
M. Sikora; J.I. Sulkowska; M. Cieplak 2009 Mechanical Strength of 17 134 Model Proteins and Cysteine Slipknots. Plos Comp. Biol.