2009

J.D. Fitzgerald; T.O. Sharpee 2009 Maximally informative pairwise interactions in networks. Physical Review E
U. Gerland; T. Hwa 2009 Evolutionary selection between alternative modes of gene regulation. Proc. Nat. Acad. Sci. USA
M. Lawrenz; R. Baron; J.A. McCammon 2009 Independent-Trajectories Thermodynamic-Integration Free-Energy Changes for Biomolecular Systems: Determinants of H5N1 Avian Influenza Virus Neuraminidase Inhibition by Peramivir. J. Chem. Theor. Comp.
C.B. Korn; S. Klumpp; R. Lipowsky; U.S. Schwarz 2009 Stochastic simulations of cargo transport by processive molecular motors. Journal of Chemical Physics
D. Xu; E.I. Newhouse; R.E. Amaro; H.C. Pao; L.S. Cheng; P.R.L. Markwick; J.A. McCammon; W.W. Li; P.… 2009 Distinct Glycan Topology for Avian and Human Sialopentasaccharide Receptor Analogues upon Binding Different Hemagglutinins: A Molecular Dynamics Perspective.
S. Klumpp; T. Hwa 2009 Traffic patrol in the transcription of ribosomal RNA. RNA Biology
I.V. Khavrutskii; A.A. Gorfe; B.Z. Lu; J.A. McCammon 2009 Free Energy for the Permeation of Na+ and Cl- Ions and Their Ion-Pair through a Zwitterionic Dimyristoyl Phosphatidylcholine Lipid Bilayer by Umbrella Integration with Harmonic Fourier Beads. J. Am. Chem. Soc.
J.D.R. Knight; D. Hamelberg; J.A. McCammon; R. Kothary 2009 The role of conserved water molecules in the catalytic domain of protein kinases. Proteins-Structure Function and Bioinformatics
L. Chen; M. Holst; J.A. McCammon 2009 Convergence and Optimality of Adaptive Mixed Finite Element Methods.
M.M. Edreira; S. Li; D. Hochbaum; S. Wong; A.A. Gorfe; F. Ribeiro-Neto; V.L. Woods; D.L. Altschuler 2009 Phosphorylation-induced Conformational Changes in Rap1b ALLOSTERIC EFFECTS ON SWITCH DOMAINS AND EFFECTOR LOOP.