2022

X. Chen; W. Lu; M.Y. Tsai; S.K. Jin; P.G. Wolynes 2022 Exploring the folding energy landscapes of heme proteins using a hybrid AWSEM-heme model. Journal of Biological Physics (01/2022)

2021

T.Y. Yao; S. Coleman; T.V.P. Nguyen; I. Golding; O.A. Igoshin 2021 Bacteriophage self-counting in the presence of viral replication. Proceedings of the National Academy of Sciences of the United States of America (Volume 118, Issue 51, 12/21/2021)
M.N. Sanches; K. Knapp; A.B. Oliveira; P.G. Wolynes; J.N. Onuchic; V.B.P. Leite 2021 Examining the Ensembles of Amyloid-beta Monomer Variants and Their Propensities to Form Fibers Using an Energy Landscape Visualization Method. Journal of Physical Chemistry B (12/2021)
S. Sahoo; S.P. Nayak; K. Hari; P. Purkait; S. Mandal; A. Kishore; H. Levine; M.K. Jolly 2021 Immunosuppressive Traits of the Hybrid Epithelial/Mesenchymal Phenotype. Frontiers in Immunology (Volume 12, Article Number 797261, 12/15/2021)
K. Klett; A.G. Cherstvy; J. Shin; I.M. Sokolov; R. Metzler 2021 Non-Gaussian, transiently anomalous, ergodic self-diffusion of flexible dumbbells in crowded two-dimensional environments: Coupled translational and rotational motions. Physical Review E (Volume 104, Issue 6, 12/3/2021)
A.O. Rausch; M.I. Freiberger; C.O. Leonetti; D.M. Luna; L.G. Radusky; P.G. Wolynes; D.U. Ferreiro;… 2021 FrustratometeR: an R-package to compute local frustration in protein structures, point mutants and MD simulations. Bioinformatics (Volume 37, Issue 18, Pages 3038-3040, 9/15/2021)
W. Chen; W. Lu; P.G. Wolynes; E.A. Komives 2021 Single-molecule conformational dynamics of a transcription factor reveals a continuum of binding modes controlling association and dissociation. Nucleic Acids Research (Volume 49, Issue 19, Pages 11211-11223, 11/8/2021)
M. Houlard; E.E. Cutts; M.S. Shamim; J. Godwin; D. Weisz; A.P. Aiden; E.L. Aiden; L. Schermelleh; A… 2021 MCPH1 inhibits Condensin II during interphase by regulating its SMC2-Kleisin interface. ELIFE (Volume 10, Article Number e73348, 12/1/2021)
Q. Wang; J. Yang; Z.C. Zhong; J.A. Vanegas; X. Gao; A.B. Kolomeisky 2021 A general theoretical framework to design base editors with reduced bystander effects. Nature Communications (Volume 12, Issue 1, Article Number 6529, 11/11/2021)
F. Trovato; J. Trylska; P.J. Bond; P.G. Wolynes 2021 Editorial: Combining Simulations, Theory, and Experiments into Multiscale Models of Biological Events. Frontiers in Molecular Biosciences (Volume 8, Article Number 797754, 11/19/2021)