2008

J. Che; J. Dzubiella; B. Li; J.A. McCammon 2008 Electrostatic free energy and its variations in implicit solvent models. J. Phys. Chem. B
I.V. Khavrutskii; M. Fajer; J.A. McCammon 2008 Intrinsic Free Energy of the Conformational Transition of the KcsA Signature Peptide from Conducting to Nonconducting State. J. Chem. Theor. Comp.
D.R. Creveling; P.E. Gill; H.D.I. Abarbanel 2008 State and parameter estimation in nonlinear systems as an optimal tracking problem. Phys. Lett. A
D. Hamelberg; A. McCammon; R.M. Stroud; J. Finer-Moore 2008 Dealing with bound waters in a site: Do they leave or stay.
A.A. Gorfe; J.A. McCammon 2008 Similar membrane affinity of mono- and di-S-acylated Ras membrane anchors: A new twist in the role of protein lipidation. J. Am. Chem. Soc.
I.V. Khavrutskii; J. Dzubiella; J.A. McCammon 2008 Computing accurate potentials of mean force in electrolyte solutions with the generalized gradient-augmented harmonic Fourier beads method. Journal of Chemical Physics
S. Klumpp; T. Hwa 2008 Growth-rate-dependent partitioning of RNA polymerases in bacteria. Proc. Nat. Acad. Sci. USA
J.N. Onuchic; C. Kobayashi; K.K. Baldridge 2008 Quantum tunneling in biological reactions: The interplay between theory and experiments.
R.V. Swift; A. McCammon 2008 Catalytically Requisite Conformational Dynamics in the mRNA-Capping Enzyme Probed by Targeted Molecular Dynamics. Biochemistry
D. Schultz; A.M. Walczak; J.N. Onuchic; P.G. Wolynes 2008 Extinction and resurrection in gene networks. Proc. Nat. Acad. Sci. USA