2008

P.C. Whitford; S. Gosavi; J.N. Onuchic 2008 Conformational transitions in adenylate kinase. Allosteric communication reduces misligation.
S.E. Wong; R. Baron; J.A. McCammon 2008 Hot-spot residues at the E9/Im9 interface help binding via different mechanisms. Biopolymers
B. Lu; Y. Zhou; M. Holst; J.A. McCammon 2008 Recent Progress in Numerical Methods for the Poisson-Boltzman Equation in Biophysical Applications. Comm. Comp. Phys.
G. Hon; B. Ren; W. Wang 2008 ChromaSig: A Probabilistic Approach to Finding Common Chromatin Signatures in the Human Genome. Plos Comp. Biol.
S.M. Bhattacharyya; B. Bagchi; P.G. Wolynes 2008 Facilitation, complexity growth, mode coupling, and activated dynamics in supercooled liquids. Proc. Nat. Acad. Sci. USA
D. Abankwa; M. Hanzal-Bayer; N. Ariotti; S.J. Plowman; A.A. Gorfe; R.G. Parton; A. McCammon; J.F.… 2008 A novel switch region regulates H-ras membrane orientation and signal output.
Y. Suzuki; J.K. Noel; J.N. Onuchic 2008 An analytical study of the interplay between geometrical and energetic effects in protein folding. Journal of Chemical Physics
L.S. Cheng; R.E. Amaro; D. Xu; W.W. Li; P.W. Arzberger; J.A. McCammon 2008 Ensemble-based virtual screening reveals potential novel antiviral compounds for avian influenza neuraminidase.
C. Mura; J.A. McCammon 2008 Molecular dynamics of a kappa B DNA element: base flipping via cross-strand intercalative stacking in a microsecond-scale simulation. Nucl. Acids Res.
R. Baron; J.A. McCammon 2008 (Thermo)dynamic role of receptor flexibility, entropy, and motional correlation in protein-ligand binding.