2022

Y.Y. Chen; D.N.L. Wu; H. Levine 2022 A physical model for dynamic assembly of human salivary stem/progenitor microstructures. Cells & Development (Volume 171, 09/2022)
W. Jia; A.S. Duddu; M.K. Jolly; H. Levine 2022 Lack of Correlation between Landscape Geometry and Transition Rates. Journal of Physical Chemistry B (07/2022)
T.N. Nguyen; H. Teimouri; A. Medvedeva; A.B. Kolomeisky 2022 Cooperativity in Bacterial Membrane Association Controls the Synergistic Activities of Antimicrobial Peptides. Journal of Physical Chemistry B (09/2022)
A. Mardt; T. Hempel; C. Clementi; F. Noe 2022 Deep learning to decompose macromolecules into independent Markovian domains. Nature Communications (Volume 13, Issue 1, 11/19/2022)
J.D. Prajapati; J.N. Onuchic; K.Y. Sanbonmatsu 2022 Exploring the Energy Landscape of Riboswitches Using Collective Variables Based on Tertiary Contacts. Journal of Molecular Biology (Volume 434, Issue 18, Special Issue: SI, 09/30/2022)
L.J. Huang; B. Clauss; M.Y. Lu 2022 What Makes a Functional Gene Regulatory Network? A Circuit Motif Analysis. Journal of Physical Chemistry B (12/2022)
M. Invernizzi; A. Kraemer; C. Clementi; F. Noe 2022 Skipping the Replica Exchange Ladder with Normalizing Flows. Journal of Physical Chemistry Letters (12/2022)
T. Bruna; R. Aryal; O. Dudchenko; D.J. Sargent; D. Mead; M. Buti; A. Cavallini; T. Hytonen; J.… 2022 A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. "Hillquist"). G3-Genes Genomes Genetics (11/2022)
R.V.R Dias; C.T.A. Ferreira; P.A. Jennings; P.C. Whitford; L.C. de Oliveira 2022 Csk ?C Helix: A Computational Analysis of an Essential Region for Conformational Transitions. Journal of Physical Chemistry B (12/2022)
Spaulding, C, Teimouri, H, Kolomeisky, AB 2022 The role of spatial structures of tissues in cancer initiation dynamics. Physical Biology (Volume 19, Issue 5, 09/01/2022)