2022

Wilder, AP, Dudchenko, O, Curry, C, Korody, M, Turbek, SP, Daly, M, Misuraca, A, Wang, GJY, Khan, R… 2022 A Chromosome-Length Reference Genome for the Endangered Pacific Pocket Mouse Reveals Recent Inbreeding in a Historically Large Population. Genome Biology and Evolution (Volume 14, Issue 8, 08/03/2022)
Garg, G, Kamphuis, LG, Bayer, PE, Kaur, P, Dudchenko, O, Taylor, CM, Frick, KM, Foley, RC, Gao, LL… 2022 A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits. Plant Journal (07/02/2022)
Freitas, FC, Maldonado, M, Oliveira, AB, Onuchic, JN, de Oliveira, RJ 2022 Erratum: “Biotin-painted proteins have thermodynamic stability switched by kinetic folding routes” [J. Chem. Phys. 156, 195101 (2022)]. Journal of Chemical Physics (Volume 157, Issue 4, 07/28/2022)
Meconi, GM, Sasselli, IR, Bianco, V, Onuchic, JN, Coluzza, I 2022 Key aspects of the past 30 years of protein design. Reports on Progress in Physics (Volume 85, Issue 8, 08/01/2022)
Contessoto, VG, Cheng, RR, Onuchic, JN 2022 Uncovering the statistical physics of 3D chromosomal organization using data-driven modeling. Current Opinion in Structural Biology (Volume 75, 08/2022)
Srivastava, A, Idriss, H, Taha, K, Lee, SM, Homouz, D 2022 Phosphorylation Induced Conformational Transitions in DNA Polymerase beta. Frontiers in Molecular Biosciences (Volume 9, 06/13/2022)
Chen, X, Chen, MC, Wolynes, PG 2022 Exploring the Interplay between Disordered and Ordered Oligomer Channels on the Aggregation Energy Landscapes of alpha-Synuclein. Journal of Physical Chemistry B (Volume 126, Issue 28, 07/10/2022, Pages 5250-5261)
Pogoda, K, Byfield, F, Deptula, P, Ciesluk, M, Suprewicz, L, Sklodowski, K, Shivers, JL, van Oosten… 2022 Unique Role of Vimentin Networks in Compression Stiffening of Cells and Protection of Nuclei from Compressive Stress. Nano Letters (Volume 22, Issue 12, 06/22/2022, Pages 4725-4732)
Mohr, DW, Gaughran, SJ, Paschall, J, Naguib, A, Pang, AWC, Dudchenko, O, Aiden, EL, Church, DM,… 2022 A Chromosome-Length Assembly of the Hawaiian Monk Seal (Neomonachus schauinslandi): A History of "Genetic Purging" and Genomic Stability. Genes (Volume 13, Issue 7 07/2022)
Robinson, JA, Bowie, RCK, Dudchenko, O, Aiden, EL, Hendrickson, SL, Steiner, CC, Ryder, OA, Mindell… 2022 Genetically based demographic reconstructions require careful consideration of generation time Response. Current Biology (Volume 32, Issue 8, 04/25/2022, Pages R358-R359)