2021

J. Nde; P.Z. Zhang; J.C. Ezerski; W. Lu; K. Knapp; P.G. Wolynes; M.S. Cheung 2021 Coarse-Grained Modeling and Molecular Dynamics Simulations of Ca2+-Calmodulin. Frontiers in Molecular Biosciences (Volume 8, 08/24/2021)
H. Teimouri; T.N. Nguyen; A.B. Kolomeisky 2021 Single-cell stochastic modelling of the action of antimicrobial peptides on bacteria. Journal of The Royal Society Interface (Volume 18, Issue 182, Article Number 20210392, 09/15/2021)
Y.A. Shen; H.Y. Wu; P.J. Lu; D.Z. Wang; M. Shayegan; H. Li; W.C. Shi; Z.Z. Wang; L.H. Cai; M. Zhang… 2021 Effects of Vimentin Intermediate Filaments on the Structure and Dynamics of In Vitro Multicomponent Interpenetrating Cytoskeletal Networks. Physical Review Letters (Volume 127, Issue 10, Article Number 108101, 09/03/2021)
A.G. Gasic; A. Sarkar; M.S. Cheung 2021 Understanding protein-complex assembly through grand canonical maximum entropy modeling. Physical Review Research (Volume 3, Issue 3, Article Number 033220, 09/07/2021)
J. Shin; A.M. Berezhkovskii; A.B. Kolomeisky 2021 Crowding breaks the forward/backward symmetry of transition times in biased random walks. Journal of Chemical Physics (Volume 154, Issue 20, Article Number 204104, 05/28/2021)
J. Wang; N. Charron; B. Husic; S. Olsson; F. Noe; C. Clementi 2021 Multi-body effects in a coarse-grained protein force field. Journal of Chemical Physics (Volume 154, Issue 16, Article Number 164113, 04/28/2021)
E. Dodero-Rojas; J.N. Onuchic; P.C. Whitford 2021 Sterically confined rearrangements of SARS-CoV-2 Spike protein control cell invastion. ELIFE (Volume 10, Article Number e70362, 08/31/2021)
D.I. Staquicini; F.H.F. Tang; C. Markosian; V.J. Yao; F.I. Staquicini; E. Dodero-Rojas; V.G.… 2021 Design and proof of concept for targeted phage-based COVID-19 vaccination strategies with a streamlined cold-free supply chain. Proceedings of the National Academy of Sciences of the United States of America (Volume 118, Issue 30, Article Number e2105739118, 07/27/2021)
V. Kohar; D. Gordin; A. Katebi; H. Levine; J.N. Onuchic; M.Y. Lu 2021 Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits. Bioinformatics (Volume 37, Issue 9, Pages 1327-1329, 05/01/2021)
S.V.A. Mercedes; F. Bocci; H. Levine; J.N. Onuchic; M.K. Jolly; P.K. Wong 2021 Decoding leader cells in collective cancer invasion. Nature Reviews Cancer (07/2021)