2025

O.A. Igoshin; A.B. Kolomeisky; D.E. Makarov 2025 Uncovering dissipation from coarse observables: A case study of a random walk with unobserved internal states. Journal of Chemical Physics (Volume 162, Issue 3, 1/21/2025)
K. Hari; P. Harlapur; A. Saxena; K. Haldar; A. Girish; T. Malpani; H. Levine; M.K. Jolly 2025 Low dimensionality of phenotypic space as an emergent property of coordinated teams in biological regulatory networks. iScience (Volume 28, Issue 2, 1/29/2025)
M. Perepelitsa; I. Timofeyev; P. Murphy; O.A. Igoshin 2025 On the existence of weak solutions for the kinetic models of the motion of myxobacteria with alignment and reversals. Kinetic and Related Models (Volume 18, Issue 5, Pages 692-705, 1/11/2025)

2024

H. Mayeur; J. Leyhr; J. Mulley; N. Leurs; L. Michel; K. Sharma; R. Lagadec; J.M. Aury; O.G. Osborne… 2024 The Sensory Shark: High-quality Morphological, Genomic and Transcriptomic Data for the Small-spotted Catshark Scyliorhinus Canicula Reveal the Molecular Bases of Sensory Organ Evolution in Jawed Vertebrates. Molecular Biology and Evolution (Volume 41, Issue 12, 12/6/2024)
Y-C. Cheng; Y. Zhang; S. Tripathi; B.V. Harshavardhan; M.K. Jolly; G. Schiebinger; H. Levine; T.O.… 2024 Reconstruction of single-cell lineage trajectories and identification of diversity in fates during the epithelial-to-mesenchymal transition. PNAS (Volume 121, Issue 32)
D.A. Kessler; H. Levine 2024 Pulse instabilities can shape virus-immune coevolution. Physical Review Research (Volume 6, Issue 3 9/16/2024)
A. Medvedeva; C. Vasnetsov; V. Vasnetsov; A.B. Kolomeisky 2024 Antimicrobial Peptides as Broad-Spectrum Therapeutics: Computational Analysis to Identify Universal Physical-Chemical Features Responsible for Multitarget Activity. Journal of Physical Chemistry Letters (Volume 15, Issue 50, Pages 12416-12424, 12/11/2024)
V.S. So; M.D. Suganthi; A. Menon; M.J. Zhu; R. Zhuravel; H. Pu; P.G. Wolynes; J.N. Onuchic; G.… 2024 Trapped-ion quantum simulation of electron transfer models with tunable dissipation. Science Advances (Volume 10, Issue 51, 12/20/2024)
M. Lequerica-Mateos; J. Martin; J.N. Onuchic; F. Morcos; I. Coluzza, 2024 Designing proteins: Mimicking natural protein sequence heterogeneity. Journal of Chemical Physics (Volume 161, Issue 19, 11/23/2024)
Z.S. Ghoreyshi; H. Teimouri; A.B. Kolomeisky; J.T. George 2024 Integration of kinetic data into affinity-based models for improved T cell specificity prediction. Biophysical Journal (Volume 123, Issue 23, Pages 4115-4122, 12/2/2024)